Omics’ generation and analysis
Objectives
- To organise a subgroup of Action Participants to analyse the Blastocystis genomic and metabarcoding projects that are currently deposited in GenBank
- To generate proteomics (MALDI-TOF MS) and metabolomics (MS and NMR) data from subtypes for which cultures are available and genomic data have been analysed
- To bring experts together to analyse these data. New data will also be deposited in the newly generated Blastocystis database in WG2.
Team Leaders
Martin Kolisko
Position: Work Group 3 leader
Affiliation: Biology Centre, Czech Academy of Sciences
Research interests: Comparative Genomics, Transcriptomics, Diversity of Microbial Eukaryotes, Evolution of parasitism
Mark Van Der Giezen
Position:WP3 co-leader
Affiliation:
Research interests:
Magali Chabé
Position:WP3 co-leader
Affiliation: Univ. Lille, CNRS, Inserm, CHU Lille, Institut Pasteur de Lille, U1019 – UMR 9017 – CIIL – Center for Infection and Immunity of Lille, F-59000 Lille, France (LILLE, France)
Research interests: Gut eukaryome: the special role of intestinal protozoa in the gut microbiota